Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm5417-201ENSMUST00000079706 384 ntBASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Shisa3Q3UPR0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Gm12085-201ENSMUST00000119263 940 ntBASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Gm21814-202ENSMUST00000203277 873 ntBASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.97□□□□□ -0.17
Shisa3Q3UPR0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Odf3b-204ENSMUST00000227834 930 ntBASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shisa3Q3UPR0 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Shisa3Q3UPR0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.95□□□□□ -0.18
Shisa3Q3UPR0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms