Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp30Q3UN04 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Usp30Q3UN04 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.21■□□□□ 0.19
Usp30Q3UN04 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Usp30Q3UN04 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.21■□□□□ 0.18
Usp30Q3UN04 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.21■□□□□ 0.18
Usp30Q3UN04 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Usp30Q3UN04 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.2■□□□□ 0.18
Usp30Q3UN04 Gm11780-201ENSMUST00000136880 516 ntBASIC16.2■□□□□ 0.18
Usp30Q3UN04 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp30Q3UN04 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Gm6089-201ENSMUST00000197666 938 ntBASIC16.2■□□□□ 0.18
Usp30Q3UN04 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp30Q3UN04 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp30Q3UN04 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.19■□□□□ 0.18
Usp30Q3UN04 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp30Q3UN04 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp30Q3UN04 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.18■□□□□ 0.18
Usp30Q3UN04 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.18■□□□□ 0.18
Usp30Q3UN04 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 AV026068-213ENSMUST00000223675 1171 ntBASIC16.18■□□□□ 0.18
Usp30Q3UN04 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Usp30Q3UN04 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp30Q3UN04 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms