Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf3aQ3ULJ3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Gm11764-201ENSMUST00000120221 623 ntBASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Gm24513-201ENSMUST00000174964 138 ntBASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf3aQ3ULJ3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
Upf3aQ3ULJ3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Upf3aQ3ULJ3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Upf3aQ3ULJ3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Upf3aQ3ULJ3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Upf3aQ3ULJ3 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm27397-201ENSMUST00000184997 107 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Upf3aQ3ULJ3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf3aQ3ULJ3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Gm5682-201ENSMUST00000173402 505 ntBASIC16.93■□□□□ 0.3
Upf3aQ3ULJ3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms