Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Snx27Q3UHD6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Gm12350-201ENSMUST00000121208 462 ntBASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Gm15173-201ENSMUST00000122049 433 ntBASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Snx27Q3UHD6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Gm6089-201ENSMUST00000197666 938 ntBASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Snx27Q3UHD6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Mir5126-201ENSMUST00000175513 77 ntBASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx27Q3UHD6 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx27Q3UHD6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx27Q3UHD6 Gm18206-201ENSMUST00000207027 926 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms