Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Spg11Q3UHA3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Gm16215-201ENSMUST00000161990 637 ntBASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Gm18057-201ENSMUST00000208220 503 ntBASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Spg11Q3UHA3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Gm45384-201ENSMUST00000210451 277 ntBASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Spg11Q3UHA3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Spg11Q3UHA3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Spg11Q3UHA3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Mir1247-201ENSMUST00000116706 82 ntBASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Gm9682-201ENSMUST00000197505 556 ntBASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Spg11Q3UHA3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Spg11Q3UHA3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms