Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Gm7862-201ENSMUST00000121461 292 ntBASIC14.01□□□□□ -0.17
Q3U1D9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.01□□□□□ -0.17
Q3U1D9 Gm12497-201ENSMUST00000138778 237 ntBASIC14.01□□□□□ -0.17
Q3U1D9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.01□□□□□ -0.17
Q3U1D9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Gm6443-201ENSMUST00000203599 874 ntBASIC14.01□□□□□ -0.17
Q3U1D9 Gm9172-201ENSMUST00000212092 954 ntBASIC14.01□□□□□ -0.17
Q3U1D9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.01□□□□□ -0.17
Q3U1D9 Gm6296-201ENSMUST00000222599 943 ntBASIC14.01□□□□□ -0.17
Q3U1D9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Q3U1D9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3U1D9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Q3U1D9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Q3U1D9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Q3U1D9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14□□□□□ -0.17
Q3U1D9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Gm43514-201ENSMUST00000198852 424 ntBASIC14□□□□□ -0.17
Q3U1D9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14□□□□□ -0.17
Q3U1D9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14□□□□□ -0.17
Q3U1D9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14□□□□□ -0.17
Q3U1D9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Q3U1D9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Q3U1D9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Q3U1D9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.99□□□□□ -0.17
Q3U1D9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Q3U1D9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Q3U1D9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Q3U1D9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Gm44357-201ENSMUST00000195897 142 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm19658-201ENSMUST00000196231 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44367-201ENSMUST00000196836 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44350-201ENSMUST00000197197 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44390-201ENSMUST00000197533 144 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44313-201ENSMUST00000198018 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44486-201ENSMUST00000198508 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44314-201ENSMUST00000199263 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44394-201ENSMUST00000199558 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44484-201ENSMUST00000199873 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44466-201ENSMUST00000200264 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Gm44359-201ENSMUST00000200671 138 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.99□□□□□ -0.17
Q3U1D9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.99□□□□□ -0.17
Q3U1D9 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.99□□□□□ -0.17
Q3U1D9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Q3U1D9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Q3U1D9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Q3U1D9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.98□□□□□ -0.17
Q3U1D9 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.98□□□□□ -0.17
Q3U1D9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms