Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Prob1-201ENSMUST00000097619 3021 ntBASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 AA414768-201ENSMUST00000121924 1257 ntBASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Ctdnep1Q3TP92 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdnep1Q3TP92 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdnep1Q3TP92 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdnep1Q3TP92 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Gm25016-201ENSMUST00000158399 131 ntBASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms