Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ctdnep1Q3TP92 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Prob1-201ENSMUST00000097619 3021 ntBASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctdnep1Q3TP92 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 AA414768-201ENSMUST00000121924 1257 ntBASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ctdnep1Q3TP92 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctdnep1Q3TP92 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctdnep1Q3TP92 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Ctdnep1Q3TP92 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdnep1Q3TP92 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdnep1Q3TP92 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctdnep1Q3TP92 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Gm25016-201ENSMUST00000158399 131 ntBASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ctdnep1Q3TP92 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctdnep1Q3TP92 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms