Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim43aQ3TL54 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.17■□□□□ 0.34
Trim43aQ3TL54 App-207ENSMUST00000227737 2827 ntBASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim43aQ3TL54 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Phf7-203ENSMUST00000226565 1971 ntBASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim43aQ3TL54 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim43aQ3TL54 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
Trim43aQ3TL54 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim43aQ3TL54 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim43aQ3TL54 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trim43aQ3TL54 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim43aQ3TL54 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms