Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 AC159114.1-201ENSMUST00000220349 266 ntBASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chrna5Q2MKA5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Gm8396-201ENSMUST00000057361 823 ntBASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chrna5Q2MKA5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chrna5Q2MKA5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Grk6-207ENSMUST00000225925 2769 ntBASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chrna5Q2MKA5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Mir6956-201ENSMUST00000183598 62 ntBASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chrna5Q2MKA5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Chrna5Q2MKA5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna5Q2MKA5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna5Q2MKA5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna5Q2MKA5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Chrna5Q2MKA5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Chrna5Q2MKA5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms