Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.44□□□□□ -0.1
Chd8Q09XV5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chd8Q09XV5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Gm42693-201ENSMUST00000196779 631 ntBASIC14.43□□□□□ -0.1
Chd8Q09XV5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Gm10478-201ENSMUST00000084451 396 ntBASIC14.43□□□□□ -0.1
Chd8Q09XV5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chd8Q09XV5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Idnk-204ENSMUST00000226010 1898 ntBASIC14.42□□□□□ -0.1
Chd8Q09XV5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.42□□□□□ -0.1
Chd8Q09XV5 Gm9063-201ENSMUST00000223299 582 ntBASIC14.42□□□□□ -0.1
Chd8Q09XV5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.42□□□□□ -0.1
Chd8Q09XV5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.42□□□□□ -0.1
Chd8Q09XV5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chd8Q09XV5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Gm9385-201ENSMUST00000117563 472 ntBASIC14.41□□□□□ -0.1
Chd8Q09XV5 Rpph1-201ENSMUST00000175096 319 ntBASIC14.41□□□□□ -0.1
Chd8Q09XV5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.41□□□□□ -0.1
Chd8Q09XV5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Gm45668-201ENSMUST00000211271 493 ntBASIC14.41□□□□□ -0.1
Chd8Q09XV5 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Chd8Q09XV5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Gm11918-201ENSMUST00000121660 179 ntBASIC14.4□□□□□ -0.1
Chd8Q09XV5 Gm27680-201ENSMUST00000184192 160 ntBASIC14.4□□□□□ -0.1
Chd8Q09XV5 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.4□□□□□ -0.1
Chd8Q09XV5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.4□□□□□ -0.1
Chd8Q09XV5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.4□□□□□ -0.1
Chd8Q09XV5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Gm18018-201ENSMUST00000198273 408 ntBASIC14.4□□□□□ -0.1
Chd8Q09XV5 Gm6888-201ENSMUST00000221983 706 ntBASIC14.4□□□□□ -0.1
Chd8Q09XV5 Notumos-201ENSMUST00000151998 2659 ntBASIC14.4□□□□□ -0.1
Chd8Q09XV5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Chd8Q09XV5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Chd8Q09XV5 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.39□□□□□ -0.11
Chd8Q09XV5 Gm18622-201ENSMUST00000219361 595 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms