Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdx4Q07424 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.51□□□□□ -0.41
Cdx4Q07424 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cdx4Q07424 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx4Q07424 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx4Q07424 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx4Q07424 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cdx4Q07424 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.5□□□□□ -0.41
Cdx4Q07424 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdx4Q07424 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Cdx4Q07424 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Cdx4Q07424 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx4Q07424 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.5□□□□□ -0.41
Cdx4Q07424 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdx4Q07424 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdx4Q07424 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.49□□□□□ -0.41
Cdx4Q07424 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx4Q07424 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdx4Q07424 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdx4Q07424 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdx4Q07424 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Dancr-204ENSMUST00000132389 2347 ntBASIC12.48□□□□□ -0.41
Cdx4Q07424 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Cdx4Q07424 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Cdx4Q07424 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.48□□□□□ -0.41
Cdx4Q07424 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdx4Q07424 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdx4Q07424 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Cdx4Q07424 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms