Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.2□□□□□ -0.14
Thbs3Q05895 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Thbs3Q05895 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Thbs3Q05895 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.2□□□□□ -0.14
Thbs3Q05895 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thbs3Q05895 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Thbs3Q05895 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Thbs3Q05895 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.19□□□□□ -0.14
Thbs3Q05895 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Thbs3Q05895 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.19□□□□□ -0.14
Thbs3Q05895 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.19□□□□□ -0.14
Thbs3Q05895 Gm33142-201ENSMUST00000193913 867 ntBASIC14.19□□□□□ -0.14
Thbs3Q05895 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Thbs3Q05895 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.19□□□□□ -0.14
Thbs3Q05895 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Thbs3Q05895 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thbs3Q05895 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.18□□□□□ -0.14
Thbs3Q05895 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.18□□□□□ -0.14
Thbs3Q05895 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Thbs3Q05895 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Thbs3Q05895 Gm15794-201ENSMUST00000120182 631 ntBASIC14.18□□□□□ -0.14
Thbs3Q05895 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Thbs3Q05895 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.18□□□□□ -0.14
Thbs3Q05895 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.18□□□□□ -0.14
Thbs3Q05895 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Thbs3Q05895 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Thbs3Q05895 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Thbs3Q05895 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Thbs3Q05895 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Thbs3Q05895 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Thbs3Q05895 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.17□□□□□ -0.14
Thbs3Q05895 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Thbs3Q05895 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.17□□□□□ -0.14
Thbs3Q05895 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.17□□□□□ -0.14
Thbs3Q05895 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.17□□□□□ -0.14
Thbs3Q05895 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Thbs3Q05895 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.17□□□□□ -0.14
Thbs3Q05895 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.17□□□□□ -0.14
Thbs3Q05895 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Thbs3Q05895 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.16□□□□□ -0.14
Thbs3Q05895 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Thbs3Q05895 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Thbs3Q05895 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms