Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.77□□□□□ -0.21
Col8a1Q00780 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.77□□□□□ -0.21
Col8a1Q00780 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Col8a1Q00780 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Col8a1Q00780 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Col8a1Q00780 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.76□□□□□ -0.21
Col8a1Q00780 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Col8a1Q00780 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Col8a1Q00780 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.76□□□□□ -0.21
Col8a1Q00780 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.76□□□□□ -0.21
Col8a1Q00780 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Gm11780-201ENSMUST00000136880 516 ntBASIC13.76□□□□□ -0.21
Col8a1Q00780 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.76□□□□□ -0.21
Col8a1Q00780 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.76□□□□□ -0.21
Col8a1Q00780 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.76□□□□□ -0.21
Col8a1Q00780 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.76□□□□□ -0.21
Col8a1Q00780 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.76□□□□□ -0.21
Col8a1Q00780 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Col8a1Q00780 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Col8a1Q00780 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.75□□□□□ -0.21
Col8a1Q00780 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Col8a1Q00780 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.75□□□□□ -0.21
Col8a1Q00780 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col8a1Q00780 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Col8a1Q00780 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.75□□□□□ -0.21
Col8a1Q00780 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col8a1Q00780 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Col8a1Q00780 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col8a1Q00780 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.74□□□□□ -0.21
Col8a1Q00780 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Col8a1Q00780 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col8a1Q00780 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.74□□□□□ -0.21
Col8a1Q00780 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.74□□□□□ -0.21
Col8a1Q00780 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col8a1Q00780 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms