Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.27■□□□□ 0.03
Nkx3-2P97503 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.27■□□□□ 0.03
Nkx3-2P97503 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nkx3-2P97503 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Gm24589-201ENSMUST00000116692 94 ntBASIC15.26■□□□□ 0.03
Nkx3-2P97503 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.26■□□□□ 0.03
Nkx3-2P97503 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx3-2P97503 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.25■□□□□ 0.03
Nkx3-2P97503 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx3-2P97503 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.25■□□□□ 0.03
Nkx3-2P97503 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx3-2P97503 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.24■□□□□ 0.03
Nkx3-2P97503 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Gm27459-201ENSMUST00000184860 107 ntBASIC15.24■□□□□ 0.03
Nkx3-2P97503 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx3-2P97503 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.23■□□□□ 0.03
Nkx3-2P97503 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx3-2P97503 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.23■□□□□ 0.03
Nkx3-2P97503 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.23■□□□□ 0.03
Nkx3-2P97503 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms