Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.61□□□□□ -0.23
Npas1P97459 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.61□□□□□ -0.23
Npas1P97459 Gm42545-201ENSMUST00000202755 922 ntBASIC13.61□□□□□ -0.23
Npas1P97459 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.61□□□□□ -0.23
Npas1P97459 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Npas1P97459 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Npas1P97459 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.61□□□□□ -0.23
Npas1P97459 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Npas1P97459 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Npas1P97459 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.6□□□□□ -0.23
Npas1P97459 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.6□□□□□ -0.23
Npas1P97459 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Npas1P97459 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Npas1P97459 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.6□□□□□ -0.23
Npas1P97459 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Gm27405-201ENSMUST00000184201 112 ntBASIC13.6□□□□□ -0.23
Npas1P97459 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Npas1P97459 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Npas1P97459 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Npas1P97459 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Npas1P97459 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.6□□□□□ -0.23
Npas1P97459 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Npas1P97459 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.59□□□□□ -0.23
Npas1P97459 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Npas1P97459 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.59□□□□□ -0.23
Npas1P97459 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.59□□□□□ -0.23
Npas1P97459 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Npas1P97459 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Npas1P97459 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Npas1P97459 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Npas1P97459 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Npas1P97459 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Npas1P97459 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Npas1P97459 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Npas1P97459 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Npas1P97459 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Npas1P97459 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Npas1P97459 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Npas1P97459 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Npas1P97459 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Npas1P97459 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Npas1P97459 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Npas1P97459 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.58□□□□□ -0.24
Npas1P97459 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.58□□□□□ -0.24
Npas1P97459 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Npas1P97459 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.58□□□□□ -0.24
Npas1P97459 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Npas1P97459 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms