Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim43cP86449 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim43cP86449 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim43cP86449 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Gm27704-201ENSMUST00000185094 107 ntBASIC17.58■□□□□ 0.4
Trim43cP86449 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trim43cP86449 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Trim43cP86449 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim43cP86449 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim43cP86449 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.57■□□□□ 0.4
Trim43cP86449 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim43cP86449 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.57■□□□□ 0.4
Trim43cP86449 Gm13312-201ENSMUST00000119631 718 ntBASIC17.57■□□□□ 0.4
Trim43cP86449 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim43cP86449 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.57■□□□□ 0.4
Trim43cP86449 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trim43cP86449 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim43cP86449 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.56■□□□□ 0.4
Trim43cP86449 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim43cP86449 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim43cP86449 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Trim43cP86449 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim43cP86449 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Mir6404-201ENSMUST00000183699 94 ntBASIC17.56■□□□□ 0.4
Trim43cP86449 Gm33142-201ENSMUST00000193913 867 ntBASIC17.56■□□□□ 0.4
Trim43cP86449 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.56■□□□□ 0.4
Trim43cP86449 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trim43cP86449 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Trim43cP86449 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim43cP86449 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.56■□□□□ 0.4
Trim43cP86449 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trim43cP86449 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Trim43cP86449 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim43cP86449 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim43cP86449 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim43cP86449 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim43cP86449 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Trim43cP86449 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trim43cP86449 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim43cP86449 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms