Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim43bP86448 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim43bP86448 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim43bP86448 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.66■□□□□ 0.26
Trim43bP86448 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim43bP86448 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim43bP86448 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43bP86448 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.66■□□□□ 0.26
Trim43bP86448 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim43bP86448 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim43bP86448 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim43bP86448 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim43bP86448 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Trim43bP86448 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim43bP86448 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim43bP86448 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
Trim43bP86448 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Prob1-201ENSMUST00000097619 3021 ntBASIC16.65■□□□□ 0.26
Trim43bP86448 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim43bP86448 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim43bP86448 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim43bP86448 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Trim43bP86448 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim43bP86448 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Trim43bP86448 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Trim43bP86448 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Trim43bP86448 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43bP86448 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim43bP86448 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Gm22697-201ENSMUST00000175194 63 ntBASIC16.63■□□□□ 0.25
Trim43bP86448 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim43bP86448 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim43bP86448 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim43bP86448 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trim43bP86448 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trim43bP86448 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Trim43bP86448 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43bP86448 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim43bP86448 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Mir1668-201ENSMUST00000184114 107 ntBASIC16.62■□□□□ 0.25
Trim43bP86448 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.62■□□□□ 0.25
Trim43bP86448 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim43bP86448 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43bP86448 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim43bP86448 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43bP86448 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43bP86448 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43bP86448 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43bP86448 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43bP86448 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43bP86448 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43bP86448 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms