Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
CiitaP79621 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CiitaP79621 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.48■□□□□ 0.39
CiitaP79621 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CiitaP79621 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CiitaP79621 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Gm6376-201ENSMUST00000209407 580 ntBASIC17.48■□□□□ 0.39
CiitaP79621 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CiitaP79621 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CiitaP79621 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CiitaP79621 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CiitaP79621 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CiitaP79621 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.47■□□□□ 0.39
CiitaP79621 Gm4459-201ENSMUST00000118750 468 ntBASIC17.47■□□□□ 0.39
CiitaP79621 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CiitaP79621 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.47■□□□□ 0.39
CiitaP79621 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.47■□□□□ 0.39
CiitaP79621 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CiitaP79621 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CiitaP79621 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CiitaP79621 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CiitaP79621 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CiitaP79621 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.46■□□□□ 0.39
CiitaP79621 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CiitaP79621 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.46■□□□□ 0.39
CiitaP79621 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.46■□□□□ 0.39
CiitaP79621 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.46■□□□□ 0.39
CiitaP79621 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.46■□□□□ 0.39
CiitaP79621 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.46■□□□□ 0.39
CiitaP79621 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.46■□□□□ 0.39
CiitaP79621 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CiitaP79621 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.46■□□□□ 0.39
CiitaP79621 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CiitaP79621 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CiitaP79621 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CiitaP79621 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CiitaP79621 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.46■□□□□ 0.38
CiitaP79621 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CiitaP79621 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CiitaP79621 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CiitaP79621 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.44■□□□□ 0.38
CiitaP79621 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CiitaP79621 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CiitaP79621 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms