Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ufd1P70362 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ufd1P70362 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Ufd1P70362 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ufd1P70362 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ufd1P70362 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ufd1P70362 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Gm15375-201ENSMUST00000119510 849 ntBASIC13.93□□□□□ -0.18
Ufd1P70362 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.93□□□□□ -0.18
Ufd1P70362 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.93□□□□□ -0.18
Ufd1P70362 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.93□□□□□ -0.18
Ufd1P70362 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.93□□□□□ -0.18
Ufd1P70362 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ufd1P70362 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.93□□□□□ -0.18
Ufd1P70362 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.92□□□□□ -0.18
Ufd1P70362 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.92□□□□□ -0.18
Ufd1P70362 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ufd1P70362 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.92□□□□□ -0.18
Ufd1P70362 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Gm7290-201ENSMUST00000104990 617 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Gm12918-201ENSMUST00000120234 636 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Gm15710-201ENSMUST00000121821 636 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Gm5075-201ENSMUST00000196916 622 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Gm10033-202ENSMUST00000211874 928 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
Ufd1P70362 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ufd1P70362 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.92□□□□□ -0.18
Ufd1P70362 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.92□□□□□ -0.18
Ufd1P70362 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ufd1P70362 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ufd1P70362 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ufd1P70362 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ufd1P70362 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Asic1-205ENSMUST00000228185 1818 ntBASIC13.91□□□□□ -0.18
Ufd1P70362 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Ufd1P70362 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Ufd1P70362 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
Ufd1P70362 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Ufd1P70362 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Ufd1P70362 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ufd1P70362 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms