Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.14■□□□□ 0.01
Six5P70178 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Six5P70178 Gm7977-201ENSMUST00000193787 748 ntBASIC15.14■□□□□ 0.01
Six5P70178 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Six5P70178 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Six5P70178 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.13■□□□□ 0.01
Six5P70178 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Six5P70178 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Six5P70178 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Six5P70178 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Six5P70178 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Six5P70178 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.13■□□□□ 0.01
Six5P70178 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Six5P70178 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Six5P70178 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Six5P70178 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Six5P70178 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.12■□□□□ 0.01
Six5P70178 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Six5P70178 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.12■□□□□ 0.01
Six5P70178 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Six5P70178 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Six5P70178 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Six5P70178 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Six5P70178 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Six5P70178 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Six5P70178 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Six5P70178 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Six5P70178 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Six5P70178 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.11■□□□□ 0.01
Six5P70178 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Six5P70178 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Six5P70178 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Six5P70178 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Six5P70178 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms