Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.37□□□□□ -0.11
Sf3b6P59708 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.37□□□□□ -0.11
Sf3b6P59708 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sf3b6P59708 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sf3b6P59708 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Sf3b6P59708 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3b6P59708 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.36□□□□□ -0.11
Sf3b6P59708 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sf3b6P59708 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3b6P59708 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.36□□□□□ -0.11
Sf3b6P59708 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sf3b6P59708 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3b6P59708 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.36□□□□□ -0.11
Sf3b6P59708 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sf3b6P59708 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sf3b6P59708 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Sf3b6P59708 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.35□□□□□ -0.11
Sf3b6P59708 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sf3b6P59708 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b6P59708 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b6P59708 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Sf3b6P59708 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.34□□□□□ -0.11
Sf3b6P59708 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.34□□□□□ -0.11
Sf3b6P59708 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sf3b6P59708 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b6P59708 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b6P59708 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b6P59708 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sf3b6P59708 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sf3b6P59708 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3b6P59708 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3b6P59708 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3b6P59708 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sf3b6P59708 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Sf3b6P59708 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Sf3b6P59708 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sf3b6P59708 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sf3b6P59708 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms