Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.82■■□□□ 1.08
Nphp4P59240 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nphp4P59240 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nphp4P59240 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nphp4P59240 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nphp4P59240 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nphp4P59240 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Nphp4P59240 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nphp4P59240 Gm25911-201ENSMUST00000157621 56 ntBASIC21.81■■□□□ 1.08
Nphp4P59240 Gm19164-201ENSMUST00000210667 640 ntBASIC21.81■■□□□ 1.08
Nphp4P59240 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nphp4P59240 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Nphp4P59240 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nphp4P59240 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nphp4P59240 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Nphp4P59240 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nphp4P59240 Wnt10b-206ENSMUST00000228546 2709 ntBASIC21.81■■□□□ 1.08
Nphp4P59240 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Nphp4P59240 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nphp4P59240 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC21.8■■□□□ 1.08
Nphp4P59240 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC21.8■■□□□ 1.08
Nphp4P59240 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC21.8■■□□□ 1.08
Nphp4P59240 Gm11185-201ENSMUST00000117732 1007 ntBASIC21.8■■□□□ 1.08
Nphp4P59240 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.8■■□□□ 1.08
Nphp4P59240 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC21.8■■□□□ 1.08
Nphp4P59240 Gm4899-201ENSMUST00000178708 719 ntBASIC21.8■■□□□ 1.08
Nphp4P59240 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Nphp4P59240 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC21.8■■□□□ 1.08
Nphp4P59240 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC21.8■■□□□ 1.08
Nphp4P59240 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
Nphp4P59240 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nphp4P59240 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Nphp4P59240 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Gm9682-201ENSMUST00000197505 556 ntBASIC21.79■■□□□ 1.08
Nphp4P59240 Gm45167-201ENSMUST00000208007 322 ntBASIC21.79■■□□□ 1.08
Nphp4P59240 Gm45683-201ENSMUST00000210825 1247 ntBASIC21.79■■□□□ 1.08
Nphp4P59240 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC21.79■■□□□ 1.08
Nphp4P59240 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nphp4P59240 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC21.78■■□□□ 1.08
Nphp4P59240 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Nphp4P59240 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Gm27300-201ENSMUST00000184085 97 ntBASIC21.78■■□□□ 1.08
Nphp4P59240 Gm27335-201ENSMUST00000184758 97 ntBASIC21.78■■□□□ 1.08
Nphp4P59240 AC131709.1-201ENSMUST00000224731 1180 ntBASIC21.78■■□□□ 1.08
Nphp4P59240 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Haglr-201ENSMUST00000100000 2085 ntBASIC21.78■■□□□ 1.08
Nphp4P59240 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nphp4P59240 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nphp4P59240 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC21.77■■□□□ 1.08
Nphp4P59240 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC21.77■■□□□ 1.08
Nphp4P59240 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nphp4P59240 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nphp4P59240 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Nphp4P59240 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nphp4P59240 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.77■■□□□ 1.08
Nphp4P59240 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21.77■■□□□ 1.08
Nphp4P59240 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC21.77■■□□□ 1.08
Nphp4P59240 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nphp4P59240 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nphp4P59240 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nphp4P59240 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nphp4P59240 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Nphp4P59240 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Nphp4P59240 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms