Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tpm1P58771 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tpm1P58771 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tpm1P58771 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.08■□□□□ 0.48
Tpm1P58771 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tpm1P58771 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.08■□□□□ 0.48
Tpm1P58771 Il3ra-202ENSMUST00000223589 738 ntBASIC18.08■□□□□ 0.48
Tpm1P58771 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tpm1P58771 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.07■□□□□ 0.48
Tpm1P58771 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.07■□□□□ 0.48
Tpm1P58771 Gm7638-201ENSMUST00000121348 967 ntBASIC18.07■□□□□ 0.48
Tpm1P58771 Gm15378-201ENSMUST00000121894 207 ntBASIC18.07■□□□□ 0.48
Tpm1P58771 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.07■□□□□ 0.48
Tpm1P58771 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Trmt13-210ENSMUST00000198454 880 ntBASIC18.07■□□□□ 0.48
Tpm1P58771 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tpm1P58771 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tpm1P58771 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Gm12085-201ENSMUST00000119263 940 ntBASIC18.06■□□□□ 0.48
Tpm1P58771 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.06■□□□□ 0.48
Tpm1P58771 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tpm1P58771 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tpm1P58771 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tpm1P58771 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tpm1P58771 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Tpm1P58771 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tpm1P58771 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tpm1P58771 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.04■□□□□ 0.48
Tpm1P58771 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Tpm1P58771 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Tpm1P58771 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Tpm1P58771 Gm12441-201ENSMUST00000121806 588 ntBASIC18.04■□□□□ 0.48
Tpm1P58771 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Asic1-205ENSMUST00000228185 1818 ntBASIC18.04■□□□□ 0.48
Tpm1P58771 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tpm1P58771 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.04■□□□□ 0.48
Tpm1P58771 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tpm1P58771 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms