Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nub1P54729 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nub1P54729 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nub1P54729 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nub1P54729 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nub1P54729 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nub1P54729 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.39■□□□□ 0.37
Nub1P54729 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nub1P54729 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Gm10052-201ENSMUST00000168019 960 ntBASIC17.39■□□□□ 0.37
Nub1P54729 Gm44430-201ENSMUST00000203376 995 ntBASIC17.39■□□□□ 0.37
Nub1P54729 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nub1P54729 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.39■□□□□ 0.37
Nub1P54729 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Gm7729-201ENSMUST00000050143 801 ntBASIC17.39■□□□□ 0.37
Nub1P54729 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nub1P54729 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nub1P54729 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nub1P54729 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nub1P54729 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Nub1P54729 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.38■□□□□ 0.37
Nub1P54729 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Nub1P54729 Olfr129-201ENSMUST00000122318 993 ntBASIC17.38■□□□□ 0.37
Nub1P54729 Gm7284-201ENSMUST00000131667 944 ntBASIC17.38■□□□□ 0.37
Nub1P54729 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.38■□□□□ 0.37
Nub1P54729 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nub1P54729 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.37■□□□□ 0.37
Nub1P54729 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.37■□□□□ 0.37
Nub1P54729 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.37■□□□□ 0.37
Nub1P54729 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.37■□□□□ 0.37
Nub1P54729 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nub1P54729 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Nub1P54729 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.36■□□□□ 0.37
Nub1P54729 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.36■□□□□ 0.37
Nub1P54729 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nub1P54729 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.36■□□□□ 0.37
Nub1P54729 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.36■□□□□ 0.37
Nub1P54729 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms