Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.93■□□□□ 0.62
LtbrP50284 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LtbrP50284 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LtbrP50284 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
LtbrP50284 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LtbrP50284 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LtbrP50284 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LtbrP50284 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LtbrP50284 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Gm13216-201ENSMUST00000117145 591 ntBASIC18.92■□□□□ 0.62
LtbrP50284 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.92■□□□□ 0.62
LtbrP50284 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.92■□□□□ 0.62
LtbrP50284 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
LtbrP50284 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.92■□□□□ 0.62
LtbrP50284 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.92■□□□□ 0.62
LtbrP50284 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC18.92■□□□□ 0.62
LtbrP50284 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.92■□□□□ 0.62
LtbrP50284 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LtbrP50284 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LtbrP50284 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.91■□□□□ 0.62
LtbrP50284 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LtbrP50284 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LtbrP50284 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.9■□□□□ 0.62
LtbrP50284 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.9■□□□□ 0.62
LtbrP50284 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LtbrP50284 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LtbrP50284 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.9■□□□□ 0.62
LtbrP50284 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
LtbrP50284 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LtbrP50284 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.89■□□□□ 0.62
LtbrP50284 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.89■□□□□ 0.61
LtbrP50284 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtbrP50284 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtbrP50284 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LtbrP50284 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
LtbrP50284 Gm11025-201ENSMUST00000140773 466 ntBASIC18.89■□□□□ 0.61
LtbrP50284 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.89■□□□□ 0.61
LtbrP50284 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.89■□□□□ 0.61
LtbrP50284 Wdyhv1-206ENSMUST00000227142 786 ntBASIC18.89■□□□□ 0.61
LtbrP50284 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtbrP50284 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtbrP50284 Haglr-201ENSMUST00000100000 2085 ntBASIC18.89■□□□□ 0.61
LtbrP50284 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtbrP50284 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtbrP50284 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LtbrP50284 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LtbrP50284 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LtbrP50284 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.88■□□□□ 0.61
LtbrP50284 Gm7222-201ENSMUST00000117512 906 ntBASIC18.88■□□□□ 0.61
LtbrP50284 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms