Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Gm17661-201ENSMUST00000170317 270 ntBASIC14.19□□□□□ -0.14
GdnfP48540 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.19□□□□□ -0.14
GdnfP48540 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.19□□□□□ -0.14
GdnfP48540 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.19□□□□□ -0.14
GdnfP48540 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GdnfP48540 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GdnfP48540 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.18□□□□□ -0.14
GdnfP48540 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GdnfP48540 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.18□□□□□ -0.14
GdnfP48540 Gm7791-201ENSMUST00000219066 539 ntBASIC14.18□□□□□ -0.14
GdnfP48540 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
GdnfP48540 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GdnfP48540 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.18□□□□□ -0.14
GdnfP48540 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GdnfP48540 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
GdnfP48540 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GdnfP48540 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Gm9731-201ENSMUST00000209480 747 ntBASIC14.17□□□□□ -0.14
GdnfP48540 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.17□□□□□ -0.14
GdnfP48540 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GdnfP48540 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.17□□□□□ -0.14
GdnfP48540 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GdnfP48540 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.17□□□□□ -0.14
GdnfP48540 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GdnfP48540 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GdnfP48540 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GdnfP48540 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
GdnfP48540 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GdnfP48540 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.16□□□□□ -0.14
GdnfP48540 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms