Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd4P46935 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd4P46935 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd4P46935 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd4P46935 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nedd4P46935 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd4P46935 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nedd4P46935 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Nedd4P46935 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Nedd4P46935 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.38■□□□□ 0.69
Nedd4P46935 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Nedd4P46935 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nedd4P46935 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd4P46935 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd4P46935 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd4P46935 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd4P46935 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd4P46935 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd4P46935 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm15427-201ENSMUST00000117288 531 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm23547-201ENSMUST00000158210 271 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm4518-201ENSMUST00000182638 718 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Mir6404-201ENSMUST00000183699 94 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd4P46935 Gm10293-201ENSMUST00000076317 1002 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Gm6316-201ENSMUST00000082064 1020 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nedd4P46935 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nedd4P46935 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.37■□□□□ 0.69
Nedd4P46935 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Nedd4P46935 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.36■□□□□ 0.69
Nedd4P46935 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.36■□□□□ 0.69
Nedd4P46935 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC19.36■□□□□ 0.69
Nedd4P46935 Gm45747-201ENSMUST00000212203 999 ntBASIC19.36■□□□□ 0.69
Nedd4P46935 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.36■□□□□ 0.69
Nedd4P46935 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.36■□□□□ 0.69
Nedd4P46935 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Nedd4P46935 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nedd4P46935 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC19.35■□□□□ 0.69
Nedd4P46935 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Nedd4P46935 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.35■□□□□ 0.69
Nedd4P46935 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
Nedd4P46935 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.35■□□□□ 0.69
Nedd4P46935 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Nedd4P46935 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nedd4P46935 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nedd4P46935 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nedd4P46935 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd4P46935 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd4P46935 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd4P46935 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd4P46935 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd4P46935 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nedd4P46935 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd4P46935 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nedd4P46935 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms