Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.19■□□□□ 0.34
HttP42859 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.19■□□□□ 0.34
HttP42859 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.19■□□□□ 0.34
HttP42859 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.19■□□□□ 0.34
HttP42859 Mir7684-201ENSMUST00000183858 60 ntBASIC17.19■□□□□ 0.34
HttP42859 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.19■□□□□ 0.34
HttP42859 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HttP42859 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Gm7774-201ENSMUST00000200064 533 ntBASIC17.18■□□□□ 0.34
HttP42859 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.18■□□□□ 0.34
HttP42859 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.18■□□□□ 0.34
HttP42859 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.18■□□□□ 0.34
HttP42859 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.18■□□□□ 0.34
HttP42859 Gm43630-201ENSMUST00000201550 776 ntBASIC17.18■□□□□ 0.34
HttP42859 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.18■□□□□ 0.34
HttP42859 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HttP42859 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.18■□□□□ 0.34
HttP42859 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HttP42859 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.17■□□□□ 0.34
HttP42859 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HttP42859 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HttP42859 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HttP42859 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HttP42859 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.17■□□□□ 0.34
HttP42859 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HttP42859 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HttP42859 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HttP42859 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.17■□□□□ 0.34
HttP42859 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.17■□□□□ 0.34
HttP42859 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HttP42859 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HttP42859 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
HttP42859 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HttP42859 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HttP42859 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HttP42859 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.16■□□□□ 0.34
HttP42859 Gm14719-201ENSMUST00000121891 340 ntBASIC17.16■□□□□ 0.34
HttP42859 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.16■□□□□ 0.34
HttP42859 Gm38294-201ENSMUST00000192831 381 ntBASIC17.16■□□□□ 0.34
HttP42859 Gm6007-201ENSMUST00000208170 823 ntBASIC17.16■□□□□ 0.34
HttP42859 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HttP42859 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HttP42859 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.16■□□□□ 0.34
HttP42859 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HttP42859 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HttP42859 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HttP42859 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HttP42859 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.16■□□□□ 0.34
HttP42859 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
HttP42859 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HttP42859 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HttP42859 Gm15693-201ENSMUST00000120470 637 ntBASIC17.15■□□□□ 0.34
HttP42859 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.15■□□□□ 0.34
HttP42859 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HttP42859 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
HttP42859 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HttP42859 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HttP42859 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HttP42859 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.15■□□□□ 0.34
HttP42859 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.15■□□□□ 0.34
HttP42859 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HttP42859 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HttP42859 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.14■□□□□ 0.34
HttP42859 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HttP42859 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.14■□□□□ 0.34
HttP42859 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HttP42859 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HttP42859 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
HttP42859 Gm24158-201ENSMUST00000175263 71 ntBASIC17.14■□□□□ 0.34
HttP42859 Gm9794-201ENSMUST00000202370 423 ntBASIC17.14■□□□□ 0.34
HttP42859 Gm44719-201ENSMUST00000206404 149 ntBASIC17.14■□□□□ 0.34
HttP42859 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.14■□□□□ 0.34
HttP42859 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HttP42859 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HttP42859 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.14■□□□□ 0.33
HttP42859 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HttP42859 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HttP42859 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HttP42859 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HttP42859 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HttP42859 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HttP42859 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HttP42859 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HttP42859 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
HttP42859 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HttP42859 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.14■□□□□ 0.33
HttP42859 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms