Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.84□□□□□ -0.03
Nkx2-2P42586 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-2P42586 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-2P42586 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-2P42586 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-2P42586 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-2P42586 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-2P42586 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-2P42586 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-2P42586 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.83□□□□□ -0.04
Nkx2-2P42586 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.83□□□□□ -0.04
Nkx2-2P42586 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-2P42586 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Olfr129-201ENSMUST00000122318 993 ntBASIC14.82□□□□□ -0.04
Nkx2-2P42586 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Gm27742-201ENSMUST00000184667 60 ntBASIC14.82□□□□□ -0.04
Nkx2-2P42586 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.82□□□□□ -0.04
Nkx2-2P42586 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.82□□□□□ -0.04
Nkx2-2P42586 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-2P42586 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gm13312-201ENSMUST00000119631 718 ntBASIC14.81□□□□□ -0.04
Nkx2-2P42586 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-2P42586 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gm27704-201ENSMUST00000185094 107 ntBASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gm7977-201ENSMUST00000193787 748 ntBASIC14.81□□□□□ -0.04
Nkx2-2P42586 Gm33142-201ENSMUST00000193913 867 ntBASIC14.81□□□□□ -0.04
Nkx2-2P42586 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms