Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.24□□□□□ -0.29
Timp3P39876 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Timp3P39876 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.24□□□□□ -0.29
Timp3P39876 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Gm44450-201ENSMUST00000199528 114 ntBASIC13.24□□□□□ -0.29
Timp3P39876 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.24□□□□□ -0.29
Timp3P39876 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.24□□□□□ -0.29
Timp3P39876 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Timp3P39876 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Timp3P39876 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Timp3P39876 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Timp3P39876 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Timp3P39876 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.23□□□□□ -0.29
Timp3P39876 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Timp3P39876 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Timp3P39876 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Timp3P39876 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.23□□□□□ -0.29
Timp3P39876 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.23□□□□□ -0.29
Timp3P39876 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Timp3P39876 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.23□□□□□ -0.29
Timp3P39876 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Timp3P39876 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.23□□□□□ -0.29
Timp3P39876 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Timp3P39876 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Timp3P39876 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.22□□□□□ -0.29
Timp3P39876 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Timp3P39876 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Timp3P39876 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Timp3P39876 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.22□□□□□ -0.29
Timp3P39876 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Timp3P39876 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms