Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk2P38575 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Upk2P38575 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Upk2P38575 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Upk2P38575 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk2P38575 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.2□□□□□ -0.14
Upk2P38575 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Upk2P38575 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.19□□□□□ -0.14
Upk2P38575 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.19□□□□□ -0.14
Upk2P38575 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk2P38575 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Gm25016-201ENSMUST00000158399 131 ntBASIC14.19□□□□□ -0.14
Upk2P38575 Mir7071-201ENSMUST00000184847 69 ntBASIC14.19□□□□□ -0.14
Upk2P38575 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.19□□□□□ -0.14
Upk2P38575 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Upk2P38575 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Upk2P38575 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Upk2P38575 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Dancr-204ENSMUST00000132389 2347 ntBASIC14.19□□□□□ -0.14
Upk2P38575 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Upk2P38575 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk2P38575 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Upk2P38575 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk2P38575 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.18□□□□□ -0.14
Upk2P38575 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk2P38575 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.18□□□□□ -0.14
Upk2P38575 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.18□□□□□ -0.14
Upk2P38575 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.18□□□□□ -0.14
Upk2P38575 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.18□□□□□ -0.14
Upk2P38575 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Upk2P38575 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Upk2P38575 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Upk2P38575 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Upk2P38575 Gm6345-202ENSMUST00000180900 204 ntBASIC14.17□□□□□ -0.14
Upk2P38575 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upk2P38575 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Upk2P38575 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms