Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxa1P35582 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxa1P35582 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.97□□□□□ -0.01
Foxa1P35582 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Foxa1P35582 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxa1P35582 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxa1P35582 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxa1P35582 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Foxa1P35582 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Foxa1P35582 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.96□□□□□ -0.01
Foxa1P35582 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
Foxa1P35582 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Foxa1P35582 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.96□□□□□ -0.01
Foxa1P35582 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Foxa1P35582 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Foxa1P35582 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.96□□□□□ -0.01
Foxa1P35582 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Foxa1P35582 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Foxa1P35582 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Foxa1P35582 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Foxa1P35582 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Foxa1P35582 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Foxa1P35582 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Foxa1P35582 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.95□□□□□ -0.02
Foxa1P35582 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Foxa1P35582 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Foxa1P35582 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.95□□□□□ -0.02
Foxa1P35582 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Gm7367-201ENSMUST00000057611 492 ntBASIC14.95□□□□□ -0.02
Foxa1P35582 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Foxa1P35582 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxa1P35582 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Foxa1P35582 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.94□□□□□ -0.02
Foxa1P35582 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Foxa1P35582 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Foxa1P35582 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.94□□□□□ -0.02
Foxa1P35582 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Foxa1P35582 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.94□□□□□ -0.02
Foxa1P35582 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.94□□□□□ -0.02
Foxa1P35582 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Foxa1P35582 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Foxa1P35582 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Foxa1P35582 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.94□□□□□ -0.02
Foxa1P35582 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.93□□□□□ -0.02
Foxa1P35582 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Foxa1P35582 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Foxa1P35582 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
Foxa1P35582 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Foxa1P35582 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.93□□□□□ -0.02
Foxa1P35582 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Foxa1P35582 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Foxa1P35582 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.92□□□□□ -0.02
Foxa1P35582 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms