Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rom1P32958 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Gm11249-201ENSMUST00000117071 859 ntBASIC12.84□□□□□ -0.35
Rom1P32958 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Il3ra-202ENSMUST00000223589 738 ntBASIC12.84□□□□□ -0.35
Rom1P32958 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.84□□□□□ -0.35
Rom1P32958 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rom1P32958 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.84□□□□□ -0.35
Rom1P32958 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Rom1P32958 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rom1P32958 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rom1P32958 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Rom1P32958 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.83□□□□□ -0.36
Rom1P32958 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Gm10849-201ENSMUST00000100397 618 ntBASIC12.83□□□□□ -0.36
Rom1P32958 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
Rom1P32958 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Rom1P32958 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.83□□□□□ -0.36
Rom1P32958 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Rom1P32958 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rom1P32958 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rom1P32958 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rom1P32958 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Rom1P32958 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Rom1P32958 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rom1P32958 Actl10-202ENSMUST00000226583 1501 ntBASIC12.83□□□□□ -0.36
Rom1P32958 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rom1P32958 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.82□□□□□ -0.36
Rom1P32958 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.82□□□□□ -0.36
Rom1P32958 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.82□□□□□ -0.36
Rom1P32958 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.82□□□□□ -0.36
Rom1P32958 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rom1P32958 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rom1P32958 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rom1P32958 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.81□□□□□ -0.36
Rom1P32958 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.81□□□□□ -0.36
Rom1P32958 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rom1P32958 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.81□□□□□ -0.36
Rom1P32958 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.81□□□□□ -0.36
Rom1P32958 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.81□□□□□ -0.36
Rom1P32958 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rom1P32958 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.81□□□□□ -0.36
Rom1P32958 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rom1P32958 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rom1P32958 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rom1P32958 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms