Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a11P31650 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.36■□□□□ 0.05
Slc6a11P31650 Gm16061-201ENSMUST00000122167 857 ntBASIC15.36■□□□□ 0.05
Slc6a11P31650 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.36■□□□□ 0.05
Slc6a11P31650 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Slc6a11P31650 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Slc6a11P31650 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.35■□□□□ 0.05
Slc6a11P31650 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Slc6a11P31650 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc6a11P31650 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.34■□□□□ 0.05
Slc6a11P31650 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a11P31650 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a11P31650 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Slc6a11P31650 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Gm7461-201ENSMUST00000058918 827 ntBASIC15.34■□□□□ 0.05
Slc6a11P31650 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a11P31650 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a11P31650 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc6a11P31650 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a11P31650 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a11P31650 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.33■□□□□ 0.05
Slc6a11P31650 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Slc6a11P31650 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Slc6a11P31650 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.33■□□□□ 0.04
Slc6a11P31650 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Slc6a11P31650 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a11P31650 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms