Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cd28P31041 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cd28P31041 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.31□□□□□ -0.12
Cd28P31041 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cd28P31041 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cd28P31041 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.31□□□□□ -0.12
Cd28P31041 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd28P31041 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Cd28P31041 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cd28P31041 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.3□□□□□ -0.12
Cd28P31041 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cd28P31041 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.3□□□□□ -0.12
Cd28P31041 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cd28P31041 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.3□□□□□ -0.12
Cd28P31041 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.3□□□□□ -0.12
Cd28P31041 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cd28P31041 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd28P31041 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cd28P31041 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Cd28P31041 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Cd28P31041 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cd28P31041 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Gm18666-201ENSMUST00000190039 958 ntBASIC14.29□□□□□ -0.12
Cd28P31041 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd28P31041 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cd28P31041 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd28P31041 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cd28P31041 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd28P31041 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cd28P31041 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cd28P31041 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.28□□□□□ -0.12
Cd28P31041 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.28□□□□□ -0.12
Cd28P31041 Gm37179-201ENSMUST00000194862 823 ntBASIC14.28□□□□□ -0.12
Cd28P31041 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.28□□□□□ -0.12
Cd28P31041 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.28□□□□□ -0.12
Cd28P31041 App-207ENSMUST00000227737 2827 ntBASIC14.28□□□□□ -0.12
Cd28P31041 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Cd28P31041 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd28P31041 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cd28P31041 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms