Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RxrbP28704 Actl10-202ENSMUST00000226583 1501 ntBASIC16.26■□□□□ 0.19
RxrbP28704 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.26■□□□□ 0.19
RxrbP28704 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.26■□□□□ 0.19
RxrbP28704 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.26■□□□□ 0.19
RxrbP28704 Timm23-208ENSMUST00000226683 750 ntBASIC16.26■□□□□ 0.19
RxrbP28704 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RxrbP28704 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RxrbP28704 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RxrbP28704 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RxrbP28704 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RxrbP28704 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RxrbP28704 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.26■□□□□ 0.19
RxrbP28704 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RxrbP28704 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RxrbP28704 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.25■□□□□ 0.19
RxrbP28704 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.25■□□□□ 0.19
RxrbP28704 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Gm13168-201ENSMUST00000121771 632 ntBASIC16.25■□□□□ 0.19
RxrbP28704 Gm10653-202ENSMUST00000139570 835 ntBASIC16.25■□□□□ 0.19
RxrbP28704 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.25■□□□□ 0.19
RxrbP28704 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RxrbP28704 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.25■□□□□ 0.19
RxrbP28704 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RxrbP28704 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RxrbP28704 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
RxrbP28704 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.25■□□□□ 0.19
RxrbP28704 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RxrbP28704 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RxrbP28704 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.24■□□□□ 0.19
RxrbP28704 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Gm12085-201ENSMUST00000119263 940 ntBASIC16.24■□□□□ 0.19
RxrbP28704 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.24■□□□□ 0.19
RxrbP28704 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RxrbP28704 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.24■□□□□ 0.19
RxrbP28704 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RxrbP28704 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RxrbP28704 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RxrbP28704 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RxrbP28704 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Phf7-203ENSMUST00000226565 1971 ntBASIC16.24■□□□□ 0.19
RxrbP28704 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RxrbP28704 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RxrbP28704 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
RxrbP28704 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RxrbP28704 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RxrbP28704 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RxrbP28704 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RxrbP28704 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.23■□□□□ 0.19
RxrbP28704 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Odf3b-204ENSMUST00000227834 930 ntBASIC16.23■□□□□ 0.19
RxrbP28704 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RxrbP28704 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RxrbP28704 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms