Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nfkb1P25799 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nfkb1P25799 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Nfkb1P25799 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nfkb1P25799 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nfkb1P25799 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nfkb1P25799 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.58■□□□□ 0.24
Nfkb1P25799 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nfkb1P25799 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.58■□□□□ 0.24
Nfkb1P25799 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nfkb1P25799 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Nfkb1P25799 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nfkb1P25799 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.57■□□□□ 0.24
Nfkb1P25799 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Nfkb1P25799 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.57■□□□□ 0.24
Nfkb1P25799 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Nfkb1P25799 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nfkb1P25799 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.56■□□□□ 0.24
Nfkb1P25799 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nfkb1P25799 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.56■□□□□ 0.24
Nfkb1P25799 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Gm7862-201ENSMUST00000121461 292 ntBASIC16.56■□□□□ 0.24
Nfkb1P25799 Gm18733-201ENSMUST00000173950 856 ntBASIC16.56■□□□□ 0.24
Nfkb1P25799 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nfkb1P25799 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.55■□□□□ 0.24
Nfkb1P25799 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.55■□□□□ 0.24
Nfkb1P25799 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.55■□□□□ 0.24
Nfkb1P25799 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Nfkb1P25799 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nfkb1P25799 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.55■□□□□ 0.24
Nfkb1P25799 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nfkb1P25799 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.54■□□□□ 0.24
Nfkb1P25799 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nfkb1P25799 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.54■□□□□ 0.24
Nfkb1P25799 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Nfkb1P25799 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.54■□□□□ 0.24
Nfkb1P25799 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.54■□□□□ 0.24
Nfkb1P25799 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nfkb1P25799 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nfkb1P25799 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Nfkb1P25799 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Nfkb1P25799 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms