Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tpm3P21107 Gm18284-201ENSMUST00000172604 624 ntBASIC18.17■□□□□ 0.5
Tpm3P21107 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tpm3P21107 Gm26571-201ENSMUST00000181399 666 ntBASIC18.17■□□□□ 0.5
Tpm3P21107 Gm27000-201ENSMUST00000182943 842 ntBASIC18.17■□□□□ 0.5
Tpm3P21107 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.17■□□□□ 0.5
Tpm3P21107 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Tpm3P21107 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tpm3P21107 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm3P21107 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm3P21107 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm3P21107 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm3P21107 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm3P21107 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tpm3P21107 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.16■□□□□ 0.5
Tpm3P21107 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tpm3P21107 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tpm3P21107 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tpm3P21107 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.15■□□□□ 0.5
Tpm3P21107 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Tpm3P21107 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.15■□□□□ 0.5
Tpm3P21107 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Gm24841-201ENSMUST00000158676 357 ntBASIC18.15■□□□□ 0.5
Tpm3P21107 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.15■□□□□ 0.5
Tpm3P21107 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.15■□□□□ 0.5
Tpm3P21107 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.15■□□□□ 0.5
Tpm3P21107 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tpm3P21107 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.15■□□□□ 0.5
Tpm3P21107 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Tpm3P21107 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tpm3P21107 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tpm3P21107 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.5
Tpm3P21107 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tpm3P21107 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Tpm3P21107 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Tpm3P21107 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Tpm3P21107 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.14■□□□□ 0.49
Tpm3P21107 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.14■□□□□ 0.49
Tpm3P21107 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.14■□□□□ 0.49
Tpm3P21107 Gm37025-201ENSMUST00000195159 829 ntBASIC18.14■□□□□ 0.49
Tpm3P21107 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.14■□□□□ 0.49
Tpm3P21107 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tpm3P21107 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.14■□□□□ 0.49
Tpm3P21107 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tpm3P21107 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.13■□□□□ 0.49
Tpm3P21107 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.13■□□□□ 0.49
Tpm3P21107 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Tpm3P21107 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.13■□□□□ 0.49
Tpm3P21107 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.13■□□□□ 0.49
Tpm3P21107 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm3P21107 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.13■□□□□ 0.49
Tpm3P21107 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms