Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.39□□□□□ -0.11
P06344 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06344 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
P06344 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
P06344 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
P06344 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.38□□□□□ -0.11
P06344 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.38□□□□□ -0.11
P06344 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Gm24589-201ENSMUST00000116692 94 ntBASIC14.38□□□□□ -0.11
P06344 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
P06344 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.38□□□□□ -0.11
P06344 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
P06344 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.38□□□□□ -0.11
P06344 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
P06344 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
P06344 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
P06344 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
P06344 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.37□□□□□ -0.11
P06344 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
P06344 Gm15372-201ENSMUST00000120729 834 ntBASIC14.37□□□□□ -0.11
P06344 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
P06344 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
P06344 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
P06344 Gm36967-201ENSMUST00000193814 266 ntBASIC14.37□□□□□ -0.11
P06344 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
P06344 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
P06344 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
P06344 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
P06344 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
P06344 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.36□□□□□ -0.11
P06344 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
P06344 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.36□□□□□ -0.11
P06344 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
P06344 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.36□□□□□ -0.11
P06344 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.36□□□□□ -0.11
P06344 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Gm34391-201ENSMUST00000203706 907 ntBASIC14.36□□□□□ -0.11
P06344 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.36□□□□□ -0.11
P06344 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
P06344 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
P06344 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.36□□□□□ -0.11
P06344 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
P06344 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms