Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Gm12644-201ENSMUST00000119935 606 ntBASIC17.57■□□□□ 0.4
P01734 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.57■□□□□ 0.4
P01734 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
P01734 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.57■□□□□ 0.4
P01734 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
P01734 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01734 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.56■□□□□ 0.4
P01734 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
P01734 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.56■□□□□ 0.4
P01734 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
P01734 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
P01734 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
P01734 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01734 Haglr-201ENSMUST00000100000 2085 ntBASIC17.56■□□□□ 0.4
P01734 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
P01734 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.55■□□□□ 0.4
P01734 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.55■□□□□ 0.4
P01734 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.55■□□□□ 0.4
P01734 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.55■□□□□ 0.4
P01734 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01734 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
P01734 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
P01734 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.54■□□□□ 0.4
P01734 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.54■□□□□ 0.4
P01734 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.54■□□□□ 0.4
P01734 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.54■□□□□ 0.4
P01734 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
P01734 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.54■□□□□ 0.4
P01734 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P01734 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
P01734 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.53■□□□□ 0.4
P01734 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Gm27459-201ENSMUST00000184860 107 ntBASIC17.53■□□□□ 0.4
P01734 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.53■□□□□ 0.4
P01734 Gm43347-201ENSMUST00000200226 580 ntBASIC17.53■□□□□ 0.4
P01734 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.53■□□□□ 0.4
P01734 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.53■□□□□ 0.4
P01734 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
P01734 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P01734 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms