Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna1P01572 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna1P01572 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna1P01572 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna1P01572 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ifna1P01572 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.67□□□□□ -0.22
Ifna1P01572 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ifna1P01572 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Gm37856-201ENSMUST00000191634 999 ntBASIC13.67□□□□□ -0.22
Ifna1P01572 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ifna1P01572 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.67□□□□□ -0.22
Ifna1P01572 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna1P01572 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ifna1P01572 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Ifna1P01572 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ifna1P01572 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.66□□□□□ -0.22
Ifna1P01572 Actl10-202ENSMUST00000226583 1501 ntBASIC13.66□□□□□ -0.22
Ifna1P01572 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ifna1P01572 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ifna1P01572 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ifna1P01572 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Ifna1P01572 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ifna1P01572 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.66□□□□□ -0.22
Ifna1P01572 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.66□□□□□ -0.22
Ifna1P01572 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.66□□□□□ -0.22
Ifna1P01572 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.66□□□□□ -0.22
Ifna1P01572 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna1P01572 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.65□□□□□ -0.22
Ifna1P01572 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ifna1P01572 Gm5643-201ENSMUST00000117081 966 ntBASIC13.65□□□□□ -0.22
Ifna1P01572 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ifna1P01572 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.65□□□□□ -0.22
Ifna1P01572 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.65□□□□□ -0.22
Ifna1P01572 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.65□□□□□ -0.22
Ifna1P01572 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ifna1P01572 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.65□□□□□ -0.22
Ifna1P01572 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna1P01572 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ifna1P01572 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ifna1P01572 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ifna1P01572 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ifna1P01572 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms