Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Vti1aO89116 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.4■□□□□ 0.38
Vti1aO89116 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Vti1aO89116 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Vti1aO89116 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.39■□□□□ 0.37
Vti1aO89116 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vti1aO89116 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.39■□□□□ 0.37
Vti1aO89116 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Vti1aO89116 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.39■□□□□ 0.37
Vti1aO89116 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.39■□□□□ 0.37
Vti1aO89116 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.39■□□□□ 0.37
Vti1aO89116 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Vti1aO89116 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vti1aO89116 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Vti1aO89116 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Vti1aO89116 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Vti1aO89116 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Gm15165-201ENSMUST00000118140 502 ntBASIC17.38■□□□□ 0.37
Vti1aO89116 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vti1aO89116 Gm44454-201ENSMUST00000198541 138 ntBASIC17.38■□□□□ 0.37
Vti1aO89116 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.38■□□□□ 0.37
Vti1aO89116 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.38■□□□□ 0.37
Vti1aO89116 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Vti1aO89116 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Vti1aO89116 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vti1aO89116 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.37■□□□□ 0.37
Vti1aO89116 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.37■□□□□ 0.37
Vti1aO89116 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.37■□□□□ 0.37
Vti1aO89116 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.37■□□□□ 0.37
Vti1aO89116 Gm44430-201ENSMUST00000203376 995 ntBASIC17.37■□□□□ 0.37
Vti1aO89116 Gm2651-201ENSMUST00000203560 838 ntBASIC17.37■□□□□ 0.37
Vti1aO89116 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.37■□□□□ 0.37
Vti1aO89116 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.37■□□□□ 0.37
Vti1aO89116 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vti1aO89116 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vti1aO89116 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vti1aO89116 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vti1aO89116 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vti1aO89116 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vti1aO89116 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vti1aO89116 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vti1aO89116 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.36■□□□□ 0.37
Vti1aO89116 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Vti1aO89116 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Vti1aO89116 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.36■□□□□ 0.37
Vti1aO89116 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vti1aO89116 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vti1aO89116 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms