Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.59■□□□□ 0.25
Syn1O88935 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Syn1O88935 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.59■□□□□ 0.25
Syn1O88935 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Syn1O88935 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Syn1O88935 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Syn1O88935 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.59■□□□□ 0.25
Syn1O88935 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Syn1O88935 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Syn1O88935 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syn1O88935 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syn1O88935 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syn1O88935 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Syn1O88935 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syn1O88935 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Syn1O88935 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.58■□□□□ 0.25
Syn1O88935 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syn1O88935 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Syn1O88935 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Syn1O88935 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.58■□□□□ 0.24
Syn1O88935 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Mir1895-201ENSMUST00000122615 79 ntBASIC16.58■□□□□ 0.24
Syn1O88935 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Gm9172-201ENSMUST00000212092 954 ntBASIC16.58■□□□□ 0.24
Syn1O88935 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.58■□□□□ 0.24
Syn1O88935 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Syn1O88935 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.57■□□□□ 0.24
Syn1O88935 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Gm27494-201ENSMUST00000184735 189 ntBASIC16.57■□□□□ 0.24
Syn1O88935 Gm44492-201ENSMUST00000197012 141 ntBASIC16.57■□□□□ 0.24
Syn1O88935 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Syn1O88935 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Syn1O88935 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Syn1O88935 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.56■□□□□ 0.24
Syn1O88935 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Syn1O88935 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
Syn1O88935 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Syn1O88935 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.56■□□□□ 0.24
Syn1O88935 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Syn1O88935 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Syn1O88935 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Syn1O88935 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Syn1O88935 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Syn1O88935 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.55■□□□□ 0.24
Syn1O88935 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Syn1O88935 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms