Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hdac3O88895 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.47□□□□□ -0.09
Hdac3O88895 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hdac3O88895 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hdac3O88895 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Hdac3O88895 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hdac3O88895 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.46□□□□□ -0.09
Hdac3O88895 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hdac3O88895 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Hdac3O88895 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.46□□□□□ -0.09
Hdac3O88895 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.46□□□□□ -0.09
Hdac3O88895 Gm18115-201ENSMUST00000221209 621 ntBASIC14.46□□□□□ -0.09
Hdac3O88895 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.46□□□□□ -0.09
Hdac3O88895 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.46□□□□□ -0.09
Hdac3O88895 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hdac3O88895 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.46□□□□□ -0.09
Hdac3O88895 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hdac3O88895 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdac3O88895 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.46□□□□□ -0.1
Hdac3O88895 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hdac3O88895 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hdac3O88895 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdac3O88895 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hdac3O88895 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdac3O88895 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Hdac3O88895 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Hdac3O88895 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Hdac3O88895 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.45□□□□□ -0.1
Hdac3O88895 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.45□□□□□ -0.1
Hdac3O88895 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.45□□□□□ -0.1
Hdac3O88895 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hdac3O88895 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.45□□□□□ -0.1
Hdac3O88895 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Gm7889-201ENSMUST00000185591 958 ntBASIC14.45□□□□□ -0.1
Hdac3O88895 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.45□□□□□ -0.1
Hdac3O88895 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.45□□□□□ -0.1
Hdac3O88895 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hdac3O88895 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hdac3O88895 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.45□□□□□ -0.1
Hdac3O88895 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hdac3O88895 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hdac3O88895 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hdac3O88895 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.44□□□□□ -0.1
Hdac3O88895 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms