Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.42□□□□□ -0.1
CcnkO88874 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CcnkO88874 Gm10812-201ENSMUST00000099864 546 ntBASIC14.42□□□□□ -0.1
CcnkO88874 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CcnkO88874 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnkO88874 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CcnkO88874 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CcnkO88874 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.41□□□□□ -0.1
CcnkO88874 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CcnkO88874 Odf3b-204ENSMUST00000227834 930 ntBASIC14.41□□□□□ -0.1
CcnkO88874 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.41□□□□□ -0.1
CcnkO88874 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CcnkO88874 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CcnkO88874 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CcnkO88874 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.4□□□□□ -0.1
CcnkO88874 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.4□□□□□ -0.1
CcnkO88874 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CcnkO88874 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CcnkO88874 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.4□□□□□ -0.1
CcnkO88874 Gm715-201ENSMUST00000117865 831 ntBASIC14.4□□□□□ -0.1
CcnkO88874 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.4□□□□□ -0.1
CcnkO88874 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.4□□□□□ -0.1
CcnkO88874 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CcnkO88874 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CcnkO88874 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CcnkO88874 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
CcnkO88874 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CcnkO88874 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CcnkO88874 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CcnkO88874 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.39□□□□□ -0.11
CcnkO88874 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.39□□□□□ -0.11
CcnkO88874 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.39□□□□□ -0.11
CcnkO88874 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.39□□□□□ -0.11
CcnkO88874 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.39□□□□□ -0.11
CcnkO88874 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.39□□□□□ -0.11
CcnkO88874 Gm9731-201ENSMUST00000209480 747 ntBASIC14.39□□□□□ -0.11
CcnkO88874 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.39□□□□□ -0.11
CcnkO88874 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CcnkO88874 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CcnkO88874 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.38□□□□□ -0.11
CcnkO88874 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CcnkO88874 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CcnkO88874 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms