Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tom1O88746 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.36■■□□□ 1.01
Tom1O88746 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC21.36■■□□□ 1.01
Tom1O88746 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC21.36■■□□□ 1.01
Tom1O88746 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tom1O88746 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.36■■□□□ 1.01
Tom1O88746 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tom1O88746 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tom1O88746 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Tom1O88746 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tom1O88746 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tom1O88746 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tom1O88746 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tom1O88746 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tom1O88746 Gm13453-201ENSMUST00000118708 357 ntBASIC21.35■■□□□ 1.01
Tom1O88746 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tom1O88746 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC21.35■■□□□ 1.01
Tom1O88746 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC21.35■■□□□ 1.01
Tom1O88746 Gm13410-201ENSMUST00000117058 1415 ntBASIC21.35■■□□□ 1.01
Tom1O88746 Syt7-205ENSMUST00000224135 1557 ntBASIC21.35■■□□□ 1.01
Tom1O88746 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tom1O88746 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tom1O88746 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tom1O88746 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tom1O88746 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Tom1O88746 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC21.34■■□□□ 1.01
Tom1O88746 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC21.34■■□□□ 1.01
Tom1O88746 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tom1O88746 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tom1O88746 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tom1O88746 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tom1O88746 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tom1O88746 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tom1O88746 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Tom1O88746 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.33■■□□□ 1.01
Tom1O88746 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.33■■□□□ 1.01
Tom1O88746 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 Gm12017-201ENSMUST00000122453 1003 ntBASIC21.33■■□□□ 1.01
Tom1O88746 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Tom1O88746 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tom1O88746 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.33■■□□□ 1
Tom1O88746 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tom1O88746 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Tom1O88746 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Tom1O88746 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Gm9385-201ENSMUST00000117563 472 ntBASIC21.32■■□□□ 1
Tom1O88746 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Tom1O88746 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Tom1O88746 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Gm9899-201ENSMUST00000065519 555 ntBASIC21.32■■□□□ 1
Tom1O88746 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC21.32■■□□□ 1
Tom1O88746 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tom1O88746 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Tom1O88746 AC124751.1-201ENSMUST00000222716 1408 ntBASIC21.31■■□□□ 1
Tom1O88746 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tom1O88746 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Tom1O88746 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tom1O88746 Mir1938-201ENSMUST00000158746 100 ntBASIC21.31■■□□□ 1
Tom1O88746 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC21.31■■□□□ 1
Tom1O88746 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC21.31■■□□□ 1
Tom1O88746 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.31■■□□□ 1
Tom1O88746 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Tom1O88746 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tom1O88746 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Tom1O88746 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tom1O88746 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tom1O88746 Gm16215-201ENSMUST00000161990 637 ntBASIC21.3■■□□□ 1
Tom1O88746 Gm28631-201ENSMUST00000190740 334 ntBASIC21.3■■□□□ 1
Tom1O88746 Gm38294-201ENSMUST00000192831 381 ntBASIC21.3■■□□□ 1
Tom1O88746 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tom1O88746 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Tom1O88746 AC155729.1-201ENSMUST00000227758 544 ntBASIC21.3■■□□□ 1
Tom1O88746 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tom1O88746 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tom1O88746 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.3■■□□□ 1
Tom1O88746 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tom1O88746 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tom1O88746 Gm15163-201ENSMUST00000120749 1302 ntBASIC21.29■■□□□ 1
Tom1O88746 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tom1O88746 Gm6415-201ENSMUST00000118488 348 ntBASIC21.29■■□□□ 1
Tom1O88746 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC21.29■■□□□ 1
Tom1O88746 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC21.29■■□□□ 1
Tom1O88746 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tom1O88746 Mir6420-201ENSMUST00000185032 102 ntBASIC21.29■■□□□ 1
Tom1O88746 Gm44855-201ENSMUST00000205725 362 ntBASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms