Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cacna1hO88427 Gm28631-201ENSMUST00000190740 334 ntBASIC15.7■□□□□ 0.1
Cacna1hO88427 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.7■□□□□ 0.1
Cacna1hO88427 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cacna1hO88427 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cacna1hO88427 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 Gm7488-201ENSMUST00000117148 684 ntBASIC15.69■□□□□ 0.1
Cacna1hO88427 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.69■□□□□ 0.1
Cacna1hO88427 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.69■□□□□ 0.1
Cacna1hO88427 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1hO88427 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cacna1hO88427 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cacna1hO88427 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.69■□□□□ 0.1
Cacna1hO88427 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.68■□□□□ 0.1
Cacna1hO88427 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.68■□□□□ 0.1
Cacna1hO88427 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Mir1938-201ENSMUST00000158746 100 ntBASIC15.68■□□□□ 0.1
Cacna1hO88427 Mir8102-201ENSMUST00000184148 139 ntBASIC15.68■□□□□ 0.1
Cacna1hO88427 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.68■□□□□ 0.1
Cacna1hO88427 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cacna1hO88427 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.67■□□□□ 0.1
Cacna1hO88427 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cacna1hO88427 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.67■□□□□ 0.1
Cacna1hO88427 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.67■□□□□ 0.1
Cacna1hO88427 Gm15358-201ENSMUST00000119249 520 ntBASIC15.67■□□□□ 0.1
Cacna1hO88427 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cacna1hO88427 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.67■□□□□ 0.1
Cacna1hO88427 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.67■□□□□ 0.1
Cacna1hO88427 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cacna1hO88427 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms