Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.33■□□□□ 0.04
Tgfbr3O88393 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.32■□□□□ 0.04
Tgfbr3O88393 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.32■□□□□ 0.04
Tgfbr3O88393 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tgfbr3O88393 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Mir6404-201ENSMUST00000183699 94 ntBASIC15.31■□□□□ 0.04
Tgfbr3O88393 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Gm18622-201ENSMUST00000219361 595 ntBASIC15.31■□□□□ 0.04
Tgfbr3O88393 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tgfbr3O88393 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Gm25911-201ENSMUST00000157621 56 ntBASIC15.3■□□□□ 0.04
Tgfbr3O88393 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Gm27646-201ENSMUST00000183989 110 ntBASIC15.3■□□□□ 0.04
Tgfbr3O88393 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Gm10175-201ENSMUST00000086013 645 ntBASIC15.3■□□□□ 0.04
Tgfbr3O88393 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tgfbr3O88393 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tgfbr3O88393 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Tgfbr3O88393 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms