Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Pdlim3O70209 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Pdlim3O70209 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pdlim3O70209 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.67□□□□□ -0.06
Pdlim3O70209 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.67□□□□□ -0.06
Pdlim3O70209 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.67□□□□□ -0.06
Pdlim3O70209 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.67□□□□□ -0.06
Pdlim3O70209 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.67□□□□□ -0.06
Pdlim3O70209 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pdlim3O70209 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pdlim3O70209 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Pdlim3O70209 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.66□□□□□ -0.06
Pdlim3O70209 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Gm18115-201ENSMUST00000221209 621 ntBASIC14.66□□□□□ -0.06
Pdlim3O70209 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.66□□□□□ -0.06
Pdlim3O70209 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pdlim3O70209 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Asic1-205ENSMUST00000228185 1818 ntBASIC14.65□□□□□ -0.06
Pdlim3O70209 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.65□□□□□ -0.06
Pdlim3O70209 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pdlim3O70209 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 App-207ENSMUST00000227737 2827 ntBASIC14.65□□□□□ -0.06
Pdlim3O70209 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pdlim3O70209 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.65□□□□□ -0.06
Pdlim3O70209 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.64□□□□□ -0.07
Pdlim3O70209 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pdlim3O70209 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pdlim3O70209 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms