Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.34■□□□□ 0.05
Rdh5O55240 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.34■□□□□ 0.05
Rdh5O55240 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rdh5O55240 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rdh5O55240 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rdh5O55240 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Rdh5O55240 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rdh5O55240 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rdh5O55240 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rdh5O55240 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rdh5O55240 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rdh5O55240 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rdh5O55240 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rdh5O55240 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.33■□□□□ 0.04
Rdh5O55240 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rdh5O55240 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rdh5O55240 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.32■□□□□ 0.04
Rdh5O55240 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Gm5587-201ENSMUST00000206270 674 ntBASIC15.32■□□□□ 0.04
Rdh5O55240 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rdh5O55240 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rdh5O55240 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.32■□□□□ 0.04
Rdh5O55240 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.32■□□□□ 0.04
Rdh5O55240 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rdh5O55240 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rdh5O55240 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.32■□□□□ 0.04
Rdh5O55240 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.31■□□□□ 0.04
Rdh5O55240 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.31■□□□□ 0.04
Rdh5O55240 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.31■□□□□ 0.04
Rdh5O55240 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rdh5O55240 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rdh5O55240 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.3■□□□□ 0.04
Rdh5O55240 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh5O55240 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh5O55240 Gm6623-201ENSMUST00000173570 544 ntBASIC15.3■□□□□ 0.04
Rdh5O55240 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rdh5O55240 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.3■□□□□ 0.04
Rdh5O55240 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.3■□□□□ 0.04
Rdh5O55240 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh5O55240 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rdh5O55240 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms